The Red Sox transferred Story (abdomen) to the 60-day injured list Thursday, Christopher Smith of MassLive.com reports.
Story underwent surgery two weeks ago to repair a sports hernia. He had seemed to have a chance to make it back before missing 60-plus days, but now Story is ineligible for activation until after the All-Star break. Marcelo Mayer will continue to serve as Boston's primary shortstop while Story recovers.